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    Home » Gluten Free Dessert Recipes » Gluten Free Cupcakes

    Blueberry Cupcakes

    Published: May 27, 2021 · Modified: Mar 18, 2026 by Lee · This post may contain affiliate links · 2 Comments .

    Jump to Recipe Jump to Video

    These Blueberry Cupcakes are light and fluffy gluten free vanilla cupcakes mixed with fresh blueberries and topped with a creamy pink blueberry frosting! This recipe is simple to follow, takes less than an hour from start to finish and the sunning pink frosting color is all natural! If you love blueberries, this is the sweet treat for you! These beauties are gluten free, nut free, egg free and can be made vegan with a few tweaks!

    An unwrapped gluten-free blueberry cupcake sits on a plate with creamy magenta blueberry frosting.

    These Blueberry Cupcakes are truly are a gorgeous show stopper while still being super easy to make! Fresh blueberries are folded into the batter and we make a blueberry syrup to get the stunning frosting color! Using fresh or frozen fruit to make the frosting gives it that incredible flavor and color, just like with our Strawberry Filled Cupcakes!

    For more blueberry recipes, try my super popular Blueberry Cookies, my Blueberry Fudge Bars, my Blueberry Ice Cream or my Blueberry Cinnamon Rolls.

    Jump to:
    • Reasons to Love These Blueberry Cupcakes
    • Ingredient Notes
    • Substitutions and Variations
    • How to Make Blueberry Cupcakes
    • Expert Baking Tips
    • Recipe FAQs
    • More Cupcake Recipes You'll Love
    • 📖 Recipe
    • Blueberry Cupcakes

    Reasons to Love These Blueberry Cupcakes

    • Allergy Friendly- These blueberry cupcakes are gluten free, nut free, egg free and can easily be dairy free (vegan)!
    • Soft & Fluffy- The cupcakes are super soft and delicious.
    • Easy to Make- The batter mixes up in less than 20 minutes like my Lemon Blueberry Cupcakes!
    • So Much Blueberry- These cupcakes are mixed with fresh blueberries and are topped with a stunning blueberry buttercream frosting.

    Ingredient Notes

    Blueberry cupcakes ingredients in separate bowls: Sour cream, gluten free flour, cornstarch water, water, butter, blueberries, milk, baking powder, vanilla, cornstarch, baking soda, vegetable oil, granulated sugar, kosher salt, and confectioners' sugar.
    • Blueberries- This recipe uses 2 cups of blueberries. One cup folded into the batter and one cup cooked down to make the blueberry syrup. You may use frozen blueberries to make the syrup but do not use frozen for the batter. They will turn your cupcakes a blue green and while still delicious, they do not look pretty at all.
    • Granulated Sugar- We cook it with the blueberries on the stove to make a lovely syrup for the frosting and use creamed with the butter for the cupcakes themselves.
    • Gluten Free Flour- If you also have nut allergies, make sure to use a brand that’s made in a nut free facility. I really love to use Cup4Cup Multipurpose Flour because it’s free of the top 9 allergens. It also contains xanthan gum which really helps give baked goods their bounce and prevents them from falling apart. Since all multipurpose gf flours are not the same, if you use a different gluten free flour, please understand the results will most likely be different.
    • Cornstarch- We use this in the dry form to be mixed with the gluten free flour to create a lighter crumb. More like a cake flour. 
    • Milk- If there are no dairy allergies or if you’re not vegan, you can use regular whole milk. For non-dairy, use a dairy-free milk of your choosing.
    • Unsalted Butter or Vegan Baking Stick- Don’t use melted or softened; we want to cream it together with the sugar. Only use room temperature. For the frosting, only use room temperature as well. Even softened will make the frosting super runny and it won’t be fixed by putting it in the fridge. If using vegan butter, make sure it's on the cold side versus room temperature.
    • Vegetable Oil- Adds a little extra moisture into these cupcakes.
    • Sour Cream- This ingredient is key! It really helps to make the crumb of these cupcakes super light! For vegan, use a dairy-free sour cream.
    • Cornstarch Water- This helps bind everything together since the cupcakes are eggless.
    • Pure Vanilla Extract- Make sure the vanilla you use is pure and gf.
    • Confectioners' Sugar- Essential in frosting recipes, this gives the frosting its fluffy texture and sweetness!
    • Water- This frosting uses room temperature water instead of milk! Add it in slowly; you may not need it all.

    See my recipe card below for a complete list of the ingredients with measurements.

    Substitutions and Variations

    How to Make these into Vegan Cupcakes

    • Use a gluten free flour that’s free from dairy.
    • Make sure the brand of sugar you use is vegan. 
    • Use vegan baking sticks instead of butter.
    • Only use a non-dairy milk of choice.
    • Use a vegan sour cream.

    Make this Recipe with All Purpose Flour

    • Use 1 ¼ packed cups of regular flour (210 grams).
    • Only use ½ cup of milk.

    This recipe has not been tested with some of these substitutions and/or variations due to celiac disease and food allergies. If you change any of the ingredients, please let us know how the recipe turned out in the comments below!

    The tight magenta swirl of blueberry frosting with blueberry drizzle on the blueberry cupcakes.

    How to Make Blueberry Cupcakes

    Here are the step by step instructions to make these eggless blueberry cupcakes!

    Bursted blueberries heated in a saucepan.

    Step 1: Cook the Blueberries, Sugar and Salt

    Place the blueberries, sugar and salt together in a saucepan set over medium heat.

    Cook (stirring frequently and smashing the blueberries with the back of a spoon) for about 5 min until it begins to boil.

    Turn the heat to low and let it simmer for an additional 5 minutes, stirring frequently.

    Magenta blueberry liquid blended and strained smooth.

    Step 2: Blend the Blueberries

    Using an immersion blender or a regular blender, carefully blend the hot blueberries until there are no chunks.

    Then place a mesh colander over a heat proof bowl and pour the mixture through the colander to strain it. Gently press down on the blueberry chunks with the back of a spoon to get all the liquid out.

    Set aside to cool while you make and bake the cupcakes.

    A whisk with the white dry ingredients.

    Step 3: Whisk Together the Dry Ingredients

    In a large bowl, whisk together the gluten free flour and 2 tablespoons of cornstarch.

    Then whisk in the baking powder, baking soda and remaining kosher salt. Set aside.

    Milky white cornstarch water in a bowl.

    Step 4: Make the Cornstarch Water

    In a small bowl, using a spoon, mix together the cornstarch and water until thin and watery. It will be thick and tacky at first.

    Creamed butter and sugar.

    Step 5: Cream the Butter and Sugar

    Beat the butter and the sugar until soft and creamy; about 2 minutes.

    Mixing the wet ingredients into the butter.

    Step 6:  Add in Wet Ingredients Minus the Milk

    Slowly beat the cornstarch water mixture into the creamed butter and sugar. 

    With the mixer still on low speed, mix in the sour cream, vanilla and oil. The mixture will look chunky; that's normal.

    Mixing in the dry ingredients.

    Step 7: Add in the Dry Ingredients, then the Milk

    Slowly beat in the gluten free flour mixture a little at a time until just combined.

    With the mixer on low speed, slowly pour the milk into the batter. Mix until just combined. Scrape down sides and combine.

    Folding in whole fresh blueberries into the batter.

    Step 8: Fold in the Blueberries

    Gently toss the washed and dried blueberries in flour.

    Using a spatula, gently fold the blueberries into the batter until just combined.

    Filling a lined cupcake tin with the blueberry cupcake batter.

    Step 9: Fill the Cupcake Tins

    Use an ice cream scoop to fill the cupcake tins ¾ way to the top. Smooth the tops with a small knife. There should be enough batter for 16 cupcakes.

    Do not overfill the cupcakes. This will result in them spilling out of the top and not baking evenly inside.

    Fresh-baked, golden and risen blueberry cupcake bottoms in the tin.

    Step 10: Bake the Cupcakes and Cool

    Bake the cupcakes at 350 degrees Fahrenheit for 24 minutes or until the tops of the cupcakes are golden brown, spring back at you when carefully touched or when a toothpick inserted comes out clean.

    Let the cupcakes cool almost completely in the pan before trying to remove them.

    A spatula with creamy magenta blueberry frosting.

    Step 11: Make the Blueberry Frosting

    Beat the butter until smooth; about 2 minutes.

    Then slowly beat in the confectioners’ sugar, 5 tablespoons blueberry syrup until combined.

    Slowly beat in the water a little at a time until you get the desired consistency. You may not need to use all the water.

    A piped swirl of blueberry frosting on the blueberry cupcakes.

    Step 12: Frost the Cupcakes

    Pipe the blueberry buttercream on top of each cooled cupcake or frost with an icing spatula.

    Drizzling on blueberry liquid to the top of the blueberry cuopcakes.

    Step 13: Drizzle Extra Blueberry Syrup

    If desired, drizzle a little extra blueberry syrup on top of each cupcake. Top with a fresh blueberry and enjoy!

    Expert Baking Tips

    • Make the Blueberry Syrup First- Make the syrup prior to making the cupcakes. It needs to cool while you make the cupcakes before adding it into the frosting.
    • Use Packed Cups of Flour- Normally in baking we do not use packed cups however, when working with gluten free, I've found using packed cups works best to help the baked goods keep their shape. Or read the gram measurement.
    • Use Room Temperature Ingredients- Make sure to use ingredients that are all room temperature or the batter might split.
    • Smooth the Batter- Many gluten free batters have a way of staying exactly as they are placed, when baked. When the batter is in the cupcake pan, gently smooth the tops with a butter knife prior to baking.
    • Use Paper Muffin Liners- It will ensure you're able to get the cupcakes out of the tins. If you don't have any paper liners, grease each cupcake tin with vegetable oil prior to adding the batter.
    • Cool the Cupcakes- Make sure the cupcakes have cooled completely prior adding the curd and frosting.
    • Making The Frosting- If the frosting is too liquidy, add more confectioners’ sugar 1 tablespoon at a time until you reach the desired consistency. It should be thick enough to stay put on the cupcakes and not run off. If the frosting appears too thick, add a little water ¼ teaspoon at a time.

    Recipe FAQs

    Can I make the blueberry cupcakes ahead of time?


    You can, but they are freshest the first day. If making them ahead of time, make the night before and store them, already frosted, in an airtight container in the fridge.

    If you refrigerate them without frosting them, the cupcakes can form a sticky later on the top.

    Can I make the blueberry frosting ahead of time?


    Yes! Store the frosting in a bowl covered with plastic wrap in the fridge.

    When ready to use, bring the frosting to room temperature and rewhip it to regain that creaminess. 

    Do I have to use sour cream in this recipe?


    If you want these cupcakes to be super light and fluffy then you must use the sour cream. You can try yogurt instead but I have not tested it and the crumb will not be as light as with the sour cream.

    Why is my blueberry frosting a different color than yours?


    Since no food coloring is required to get that amazing hue; the color will be different every time.

    The color of the frosting will vary depending on what brand of blueberries you use to make the jam, how ripe they are and if you used fresh or frozen.

    The color is never 100 percent the same, which makes it so fun. 

    How do I store these Blueberry Cupcakes?


    Storing: Store cupcakes in an airtight container or individually wrap each cupcake in aluminum foil for up to 2 days in the fridge. Try to create a teepee with the top of the foil so it isn't touching the top of the frosting as much.

    Let each cupcake come to room temperature prior to serving.

    Freezing: Once the frosting on the cupcakes has hardened a little (you may need to pop them in the fridge), individually wrap each cupcake in aluminum foil.
    Pop them in a zip top bag and freeze the cupcakes for up to 30 days.

    To defrost, put the cupcakes in the fridge the night before or leave them out on the counter for 2 hours prior to eating or until the cupcakes are room temperature and soft.

    A blueberry cupcake with blueberry drizzle drips into a bite of the soft crumb interior.

    More Cupcake Recipes You'll Love

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    Did you try this recipe? Please leave me a ⭐ review below!

    Don’t forget to tag me on Instagram @laneandgreyfare and follow along on Pinterest and Facebook! Enjoy!!! 

    📖 Recipe

    An unwrapped gluten-free blueberry cupcake sits on a plate with creamy magenta blueberry frosting.

    Blueberry Cupcakes

    Author: Lee
    These Blueberry Cupcakes are light and fluffy gluten free vanilla cupcakes mixed with fresh blueberries and topped with a creamy pink blueberry frosting! This recipe is simple to follow, takes less than an hour from start to finish and the sunning pink frosting color is all natural! If you love blueberries, this is the sweet treat for you! These beauties are gluten free, nut free, egg free and can be made vegan with a few tweaks!
    5 from 4 votes
    Prevent your screen from going dark
    Print Recipe Pin Recipe
    Prep Time 25 minutes mins
    Cook Time 24 minutes mins
    Total Time 49 minutes mins
    Course Dessert
    Cuisine American
    Servings 16 Cupcakes
    Calories 370 kcal

    Ingredients
     
     

    For the Blueberry Syrup

    • 1 cup fresh or frozen blueberries
    • ½ cup granulated sugar
    • 1 pinch kosher salt

    For the Blueberry Cupcakes

    • 1 ¼ cups multipurpose gluten free flour (I use Cup4Cup gluten free multipurpose flour which contains xanthan gum)
    • 2 tablespoons cornstarch
    • 1 ½ teaspoons baking powder
    • ½ teaspoon baking powder
    • ¼ teaspoon kosher salt
    • 4 rounded tablespoons cornstarch mixed with 6 tablespoons water
    • ½ cup unsalted butter or vegan baking stick, room temperature
    • 1 cup granulated sugar
    • ½ cup sour cream , full fat
    • 2 tablespoons vegetable oil
    • 2 teaspoons pure vanilla extract
    • ½ cup plus 2 tablespoons milk
    • ½ cup fresh blueberries mixed with ½ tablespoon flour

    For the Blueberry Frosting

    • ½ cup butter or vegan baking stick, room temperature
    • 4 cups confectioners’ sugar
    • 5 tablespoons blueberry syrup
    • 4 teaspoons water

    Instructions
     

    • Preheat the oven to 350 degrees Fahrenheit and line a regular size cupcake pan with cupcake liners. Set aside.

    Make the Blueberry Syrup

    • Place the 1 cup blueberries, ½ cup granulated sugar and 1 pinch kosher salt together in a saucepan set over medium heat.
    • Cook (stirring frequently and smashing the blueberries with the back of a spoon) for about 5 min until it begins to boil.
      Once boiling turn the heat to low and let it simmer for an additional 5 minutes, stirring frequently.
    • Using an immersion blender or a regular blender, carefully blend the hot blueberries until there are no chunks.
    • Then place a mesh colander over a heat proof bowl and pour the mixture through the colander to strain it. Gently press down on the blueberry chunks with the back of a spoon to get all the liquid out.
      Set aside to cool while you make the cupcakes.

    Make the Blueberry Cupcakes

    • In a large bowl, whisk together the 1 ¼ cups gluten free flour and 2 tablespoons of cornstarch.
      Once combined, whisk in the 1 ½ teaspoons baking powder, ½ teaspoon baking soda and ¼ teaspoon kosher salt. Set aside.
    • In a small bowl, using a spoon, mix together the 4 rounded tablespoons of cornstarch (52 grams) with 6 tablespoons of water until thin and watery. It will be thick and tacky at first.
    • In a large bowl of an electric mixer fitted with the paddle attachment, beat the ½ cup unsalted butter or vegan baking stick and the 1 cup granulated sugar until it is soft and creamy. About 2-3 minutes.
    • Slowly beat the cornstarch water mixture into the creamed butter and sugar. 
      With the mixer still on low speed, mix in the ½ cup sour cream, 2 teaspoons pure vanilla extract and 2 tablespoons vegetable oil. The mixture will look chunky. That's normal.
    • Slowly mix in the gluten free flour mixture a little at a time until all combined.
    • Slowly pour the ½ cup plus 2 tablespoons milk into the batter while the mixture is on low speed. Mix until just combined.
      Once it is combined, turn off the mixer and use a spatula to scrape the sides of the bowl. You don’t want to over mix this. Just make sure everything is fully combined. The batter will be thin. Set aside.
    • Take the 1 cup of blueberries and gently toss them in ½ tablespoon of gluten free flour.
      Then using a spatula, gently and carefully fold them into the batter. Try not to break the blueberries apart or your cupcakes will turn blue/green.
    • Use an ice cream scoop to fill the cupcake tins ¾ way to the top. Smooth the tops with a small knife. There should be enough batter for 16 cupcakes.
      You do not want to overfill the cupcakes. This will result in them spill out of the top and not baking evenly inside.
    • Bake the cupcakes at 350 degrees Fahrenheit for 24 minutes or until the tops of the cupcakes are golden brown, spring back at you when carefully touched or when a toothpick inserted comes out clean.
      Let the cupcakes cool almost completely in the pan before trying to remove them.

    Make the Blueberry Frosting

    • While the cupcakes are baking, make the frosting.
      In the large bowl of an electric mixer or using a hand held mixer, beat the ½ cup unsalted butter or vegan baking stick until smooth and creamy. About 2 minutes.
    • With the mixer on very low speed, slowly add in the 4 cups confectioners' sugar and 5 tablespoons blueberry syrup. Beat until combined.
    • While the mixer is on, slowly add in the 4 teaspoons water a little at a time until you get the desired consistency. You may not need to use all the water. You want the frosting to be soft enough to pipe yet still be able to hold its shape.

    Assemble the Cupcakes

    • If you have piping bags, pipe the blueberry frosting on top of each cool cupcake.
      If you don’t have piping bags, put a thin layer of frosting on top of each cupcake.
      If you frosted the cupcakes by hand, pop the cupcakes in the fridge for 15 minutes to let that thin layer harden. 
    • If desired, drizzle the extra blueberry syrup on top of the blueberry buttercream frosting. Top with a fresh blueberry or eat as is! Enjoy!

    Video

    Notes

    Vegan: Use a dairy-free gluten free flour, vegan sugar, vegan baking sticks, non-dairy milk and vegan sour cream.
    Gluten Free Flour- If you also have nut allergies, make sure to use a brand that’s made in a nut free facility. I really love to use Cup4Cup Multipurpose Flour because it’s free of the top 9 allergens. It also contains xanthan gum which really helps give baked goods their bounce and prevents them from falling apart. Since all multipurpose gf flours are not the same, if you use a different gluten free flour, please understand the results will most likely be different.
    All Purpose Flour: I cannot test this due to celiac disease, but use 1 ¼ cups packed AP flour (210 grams) and ½ cup milk.
    Storing: Store the cupcakes in an airtight container or wrapped in foil in the fridge for up to 2 days, or in the freezer for 30 days. Let come to room temperature prior to eating. 
    Nutrition: The info below is a generated estimate and is not guaranteed to be accurate.
     

    Nutrition

    Calories: 370kcalCarbohydrates: 59gProtein: 2gFat: 15gSaturated Fat: 8gPolyunsaturated Fat: 2gMonounsaturated Fat: 4gTrans Fat: 0.5gCholesterol: 36mgSodium: 144mgPotassium: 36mgFiber: 1gSugar: 50gVitamin A: 419IUVitamin C: 1mgCalcium: 57mgIron: 0.5mg
    Tried this recipe?Let us know how it was!

    More Gluten Free Cupcakes

    • A golden lemon blueberry cupcake with a creamy swirl of lavender blueberry frosting and lemon glaze drizzle.
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    • A bite through the chocolate frosting and into the Chocolate Chip Muffin reveals the soft interior.
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    • A perfect halved Pumpkin Cupcake reveals its light and fluffy interior.
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    Comments

    1. Steve says

      July 13, 2022 at 7:23 pm

      5 stars
      I love blueberry jam. And cupcakes! They were perfect together!

      Reply
    2. john says

      May 02, 2022 at 5:37 pm

      5 stars
      I love the color of the frosting that i made using this recipe!

      Reply
    5 from 4 votes (2 ratings without comment)

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    Lee, the beautiful founder of Lane and Grey Fare.

    Hi guys, I'm Lee! As a mother of two children with celiac disease and multiple food allergies, I wanted to share all that I’ve learned with others in a way that’s entertaining and helpful. All my food is 100 percent gluten free, nut free, seed free, egg free and most of my baked goods can easily be made dairy free (vegan).

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